Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2928

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2927: 11295 - K07955 ARL8 ADP-ribosylation factor-like protein 8, at 573302 to 574331 11295 mRNA_2928: 11296 - Hypothetical Protein, at 574492 to 576496 11296 mRNA_2929: 11297 - Hypothetical Protein, at 576993 to 577700 11297

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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573,660 - 11295 mRNA_2927 0.35 -1.3
574,183 + 11295 mRNA_2927 0.86 0.5
574,194 + 11295 mRNA_2927 0.87 1.0
574,314 - 1.3
574,318 - -1.1
574,328 + 1.8
574,460 + 1.8
574,460 - 0.5
574,584 - -1.7
574,620 - 0.3
574,633 - -0.8
574,637 + 0.2
574,644 - 0.0
574,648 - -0.1
574,776 - 11296 mRNA_2928 0.14 0.8
574,808 - 11296 mRNA_2928 0.16 0.1
574,898 - 11296 mRNA_2928 0.20 -1.2
575,021 - 11296 mRNA_2928 0.26 1.7
575,062 - 11296 mRNA_2928 0.28 1.8
575,064 - 11296 mRNA_2928 0.29 -0.0
575,194 - 11296 mRNA_2928 0.35 -0.1
575,199 + 11296 mRNA_2928 0.35 -0.8
575,548 + 11296 mRNA_2928 0.53 0.7
575,827 + 11296 mRNA_2928 0.67 4.1
576,030 - 11296 mRNA_2928 0.77 -0.2
576,225 - 11296 mRNA_2928 0.86 -0.5
576,245 - 11296 mRNA_2928 0.87 0.6
576,620 + 2.4
576,639 - 1.2
576,904 + -1.1
576,912 + 0.1
577,194 + 11297 mRNA_2929 0.28 1.8