Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2912

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279 mRNA_2912: 11280 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 521953 to 523755 11280 mRNA_2913: 11281 - K13703 ABHD11 abhydrolase domain-containing protein 11, at 524044 to 525341 11281

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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521,431 - 11279 mRNA_2911 0.86 0.4
521,670 - 0.3
522,165 - 11280 mRNA_2912 0.12 -0.4
522,647 - 11280 mRNA_2912 0.38 0.2
522,904 - 11280 mRNA_2912 0.53 -1.2
522,933 + 11280 mRNA_2912 0.54 0.2
523,496 - 11280 mRNA_2912 0.86 -0.2
523,618 - -0.7
523,779 - -0.9
524,225 - 11281 mRNA_2913 0.14 2.1
524,231 - 11281 mRNA_2913 0.14 1.7
524,608 + 11281 mRNA_2913 0.43 1.5
524,755 - 11281 mRNA_2913 0.55 1.0