Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2904

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2903: 11271 - K06662 HRAD17, RAD24 cell cycle checkpoint protein, at 500559 to 503580 11271 mRNA_2904: 11272 - K03847 ALG12 alpha-1,6-mannosyltransferase, at 503747 to 505698 11272 mRNA_2905: 11273 - Hypothetical Protein, at 505810 to 506740 11273

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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502,933 + 11271 mRNA_2903 0.79 -0.0
503,382 - 0.6
503,444 + -2.6
503,702 - -0.5
503,702 + -0.6
504,007 - 11272 mRNA_2904 0.13 -1.5
504,046 + 11272 mRNA_2904 0.15 -2.5
504,147 - 11272 mRNA_2904 0.20 -2.8
504,303 + 11272 mRNA_2904 0.28 -1.1
504,310 + 11272 mRNA_2904 0.29 -2.6
504,886 - 11272 mRNA_2904 0.58 -2.8
504,901 + 11272 mRNA_2904 0.59 -3.9
505,037 + 11272 mRNA_2904 0.66 -4.0
505,167 - 11272 mRNA_2904 0.73 -0.4
505,174 + 11272 mRNA_2904 0.73 -1.5
505,205 - 11272 mRNA_2904 0.75 -1.4
505,706 + -0.0
505,793 + 1.0
506,471 - 11273 mRNA_2905 0.71 0.4