Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2880

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2880: 11248 - K10531 pvdA L-ornithine N5-oxygenase, at 436140 to 438445 11248 mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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435,639 + 1.1
435,681 - 0.8
435,712 + 1.8
435,719 - -0.4
435,735 - 0.8
435,767 + -0.8
435,857 + -1.0
435,875 + 0.2
435,880 + -0.1
435,947 + 0.1
435,948 - 0.8
436,005 - 0.9
436,012 - -0.0
436,014 + 0.5
436,016 + 1.3
436,023 + 0.5
436,040 - 0.7
436,049 - 1.2
436,058 - 0.0
436,058 + -0.5
436,060 + -0.9
436,063 + -0.4
436,084 - -0.1
436,088 + 0.5
436,185 - 0.4
436,215 - 0.7
436,224 - 1.4
436,225 - 0.8
436,248 + 0.4
436,340 - 1.6
436,357 + -0.7
436,390 + 11248 mRNA_2880 0.11 0.4
436,514 + 11248 mRNA_2880 0.16 2.2
436,540 - 11248 mRNA_2880 0.17 -1.1
436,563 + 11248 mRNA_2880 0.18 2.1
436,576 + 11248 mRNA_2880 0.19 -0.7
436,583 - 11248 mRNA_2880 0.19 -0.2
436,584 + 11248 mRNA_2880 0.19 1.0
436,611 + 11248 mRNA_2880 0.20 0.9
436,617 - 11248 mRNA_2880 0.21 0.5
436,674 - 11248 mRNA_2880 0.23 1.8
436,690 - 11248 mRNA_2880 0.24 0.7
436,699 + 11248 mRNA_2880 0.24 -0.6
436,706 + 11248 mRNA_2880 0.25 0.9
436,706 - 11248 mRNA_2880 0.25 -0.3
436,711 - 11248 mRNA_2880 0.25 -0.3
436,799 + 11248 mRNA_2880 0.29 0.6
436,849 - 11248 mRNA_2880 0.31 -0.9
437,158 - 11248 mRNA_2880 0.44 -0.1
437,211 + 11248 mRNA_2880 0.46 1.0
437,289 - 11248 mRNA_2880 0.50 1.3
437,502 - 11248 mRNA_2880 0.59 -0.7
437,510 + 11248 mRNA_2880 0.59 0.0
437,602 - 11248 mRNA_2880 0.63 1.0
437,952 + 11248 mRNA_2880 0.79 1.2
437,964 - 11248 mRNA_2880 0.79 3.3
438,115 - 11248 mRNA_2880 0.86 -0.4
438,366 - 0.2
438,379 - 1.6
438,391 - 1.4
438,405 + 1.0
438,415 + 0.6
438,514 + -1.7
438,519 - 2.0
438,667 - -0.4
438,669 + -1.7
438,702 - 0.0
438,785 - -0.6
438,790 + -0.4
438,816 + 0.6
438,932 - -0.4
438,940 - 1.7
438,954 + 1.5
438,966 - -0.4
438,970 + 0.2
438,972 + 0.8
438,972 + -0.1
438,973 - 0.1
438,976 - -0.7
438,977 - 0.0
438,979 - 1.3
439,006 - -1.6
439,006 - 1.6
439,006 - 0.6
439,020 + 1.4
439,020 - 1.3
439,023 + -1.4
439,031 - 0.5
439,038 - 0.5
439,038 - 0.5
439,039 - -1.4
439,039 - -0.3
439,054 + -0.2
439,111 + -0.2
439,121 - -0.3
439,138 - 1.1
439,231 - -2.1
439,233 - 0.3
439,237 + -0.8
439,242 + 0.1
439,243 - 0.1
439,246 - 0.4
439,257 + 0.9
439,275 + -0.9
439,275 - 1.7
439,284 + 2.6
439,296 + 1.4
439,322 - 0.3
439,326 - 0.5
439,330 + -1.2
439,336 + -0.6
439,337 - 1.4
439,353 + -0.2
439,375 - 1.5