Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2878

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2877: 11245 - Hypothetical Protein, at 429678 to 431024 11245 mRNA_2878: 11246 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 431152 to 434004 11246 mRNA_2879: 11247 - HMMPfam-Protein of unknown function (DUF3237)-PF11578, at 434192 to 435080 11247

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
430,225 + 11245 mRNA_2877 0.41 0.0
430,330 + 11245 mRNA_2877 0.48 0.2
430,497 + 11245 mRNA_2877 0.61 -0.6
430,563 + 11245 mRNA_2877 0.66 0.4
431,154 - 0.0
431,229 + -0.2
431,454 - 11246 mRNA_2878 0.11 -0.9
431,571 - 11246 mRNA_2878 0.15 1.6
431,591 + 11246 mRNA_2878 0.15 2.6
432,021 + 11246 mRNA_2878 0.30 2.2
432,179 + 11246 mRNA_2878 0.36 0.3
432,412 - 11246 mRNA_2878 0.44 -0.1
432,600 - 11246 mRNA_2878 0.51 -0.3
432,618 + 11246 mRNA_2878 0.51 -0.3
432,707 + 11246 mRNA_2878 0.55 0.1
432,854 + 11246 mRNA_2878 0.60 -0.1
433,091 + 11246 mRNA_2878 0.68 -1.0
433,200 - 11246 mRNA_2878 0.72 1.6
433,300 + 11246 mRNA_2878 0.75 1.3
433,340 - 11246 mRNA_2878 0.77 0.8
433,444 - 11246 mRNA_2878 0.80 -0.3
433,619 + 11246 mRNA_2878 0.86 1.3
433,619 + 11246 mRNA_2878 0.86 1.6
433,768 + -0.3
433,777 + -0.4
433,879 + -0.0
433,900 - 0.3
433,909 + 0.0
433,923 - 0.3
434,033 + 0.8
434,112 - 0.1
434,119 + -1.1
434,120 + 0.6
434,120 - -1.0
434,130 - 1.3
434,243 + 0.2
434,295 - 11247 mRNA_2879 0.12 2.1
434,697 - 11247 mRNA_2879 0.57 0.3
434,890 - 11247 mRNA_2879 0.79 1.3