Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2829

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2828: 11196 - Hypothetical Protein, at 313033 to 313687 11196 mRNA_2829: 11197 - Hypothetical Protein, at 313817 to 315093 11197 mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315328 to 317739 11198

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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312,980 + 0.3
312,981 + 1.4
312,983 - -0.6
312,987 - -0.2
313,033 - 0.9
313,141 + 11196 mRNA_2828 0.16 2.5
313,156 + 11196 mRNA_2828 0.19 -0.2
313,449 + 11196 mRNA_2828 0.64 3.8
313,868 + 1.0
313,976 + 11197 mRNA_2829 0.12 -0.1
314,027 + 11197 mRNA_2829 0.16 -2.0
314,151 - 11197 mRNA_2829 0.26 -0.8
314,159 + 11197 mRNA_2829 0.27 1.1
314,246 - 11197 mRNA_2829 0.34 -1.8
314,253 + 11197 mRNA_2829 0.34 -0.1
314,330 + 11197 mRNA_2829 0.40 1.6
314,438 - 11197 mRNA_2829 0.49 -0.0
314,458 - 11197 mRNA_2829 0.50 -0.3
314,618 - 11197 mRNA_2829 0.63 -0.9
314,618 + 11197 mRNA_2829 0.63 1.4
314,741 - 11197 mRNA_2829 0.72 1.6
315,031 - 0.4
315,053 + 2.1
315,069 + 0.4
315,618 + 11198 mRNA_2830 0.12 1.5
315,749 + 11198 mRNA_2830 0.17 -0.6