Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2804

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253457 to 256700 11171 mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257436 to 258912 11172 mRNA_2805: 11173 - KOG0128 RNA-binding protein SART3 (RRM superfamily), at 259286 to 263641 11173

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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256,596 - -0.7
256,602 - -1.6
256,603 - -0.3
256,615 - -0.4
256,784 + 0.7
256,797 + -0.6
256,890 - 0.0
256,909 + 0.1
256,923 + 0.1
256,927 + -0.8
256,935 + -0.0
256,940 + 1.7
257,059 + -0.1
257,070 - 0.5
257,073 + 0.6
257,079 + 1.6
257,090 - -0.8
257,202 - 1.9
257,211 + 1.8
257,214 - 0.3
257,219 + -0.3
257,237 + 0.5
257,240 - 0.3
257,368 + 0.6
258,247 - 11172 mRNA_2804 0.55 -0.9
258,677 - 11172 mRNA_2804 0.84 1.7
258,701 - 11172 mRNA_2804 0.86 0.4
258,812 + -0.4
258,814 - 1.2
258,820 + 1.7
259,091 - -1.0
259,096 - 0.1
259,100 + 2.4
259,116 - 1.2
259,128 + 0.4
259,146 + 0.8
259,151 - -0.1
259,203 + -0.3
259,255 - -0.4
259,283 + 2.1