Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2792

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222568 to 225746 11159 mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226043 to 228012 11160 mRNA_2793: 11161 - KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain, at 228041 to 229604 11161

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
225,092 + 11159 mRNA_2791 0.79 0.2
225,245 + 11159 mRNA_2791 0.84 1.4
225,328 + 11159 mRNA_2791 0.87 -0.2
225,407 - 11159 mRNA_2791 0.89 -2.2
225,715 + -0.5
225,717 - -0.1
226,194 + 0.2
226,424 - 11160 mRNA_2792 0.19 0.3
226,426 - 11160 mRNA_2792 0.19 1.1
226,629 + 11160 mRNA_2792 0.30 0.2
226,710 - 11160 mRNA_2792 0.34 1.0
226,734 - 11160 mRNA_2792 0.35 1.1
226,755 + 11160 mRNA_2792 0.36 -0.7
226,755 - 11160 mRNA_2792 0.36 -0.1
226,782 - 11160 mRNA_2792 0.38 2.1
226,850 + 11160 mRNA_2792 0.41 0.1
226,853 - 11160 mRNA_2792 0.41 0.0
227,080 - 11160 mRNA_2792 0.53 0.8
227,277 + 11160 mRNA_2792 0.63 -0.3
227,436 - 11160 mRNA_2792 0.71 0.5
227,732 + 11160 mRNA_2792 0.86 0.5
227,755 + 11160 mRNA_2792 0.87 -0.1
227,811 - 11160 mRNA_2792 0.90 1.8
227,816 + -0.1
227,817 - 1.0
227,824 - 2.5
227,826 + -0.8
227,828 + -0.2
227,830 + 1.1
227,837 + 0.3
228,082 - -0.5
228,104 - -0.0
228,123 + 0.4
228,123 + 1.0
228,299 + 11161 mRNA_2793 0.16 -0.3
228,303 + 11161 mRNA_2793 0.17 -0.0
228,390 - 11161 mRNA_2793 0.22 0.2
228,549 + 11161 mRNA_2793 0.32 0.2
228,563 + 11161 mRNA_2793 0.33 0.9
228,707 + 11161 mRNA_2793 0.43 1.4
228,740 + 11161 mRNA_2793 0.45 0.2
228,830 - 11161 mRNA_2793 0.50 -0.2