Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2791

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2790: 11158 - Hypothetical Protein, at 219629 to 222406 11158 mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222568 to 225746 11159 mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226043 to 228012 11160

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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221,661 + 11158 mRNA_2790 0.73 -0.1
221,753 - 11158 mRNA_2790 0.76 -0.1
221,835 + 11158 mRNA_2790 0.79 1.4
221,875 + 11158 mRNA_2790 0.81 0.2
222,068 + 11158 mRNA_2790 0.88 0.4
222,508 - 2.2
222,521 + 1.1
222,792 + -2.3
223,077 + 11159 mRNA_2791 0.16 -1.0
223,258 - 11159 mRNA_2791 0.22 0.0
223,376 + 11159 mRNA_2791 0.25 0.7
223,376 + 11159 mRNA_2791 0.25 0.1
223,607 + 11159 mRNA_2791 0.33 1.9
223,691 + 11159 mRNA_2791 0.35 0.8
223,743 - 11159 mRNA_2791 0.37 0.7
223,951 - 11159 mRNA_2791 0.44 1.4
223,971 - 11159 mRNA_2791 0.44 0.5
224,118 - 11159 mRNA_2791 0.49 0.5
224,167 + 11159 mRNA_2791 0.50 0.8
224,190 + 11159 mRNA_2791 0.51 -0.5
224,497 + 11159 mRNA_2791 0.61 2.1
224,690 + 11159 mRNA_2791 0.67 0.8
224,854 - 11159 mRNA_2791 0.72 0.6
224,875 - 11159 mRNA_2791 0.73 -0.4
225,026 - 11159 mRNA_2791 0.77 0.2
225,092 + 11159 mRNA_2791 0.79 0.2
225,245 + 11159 mRNA_2791 0.84 1.4
225,328 + 11159 mRNA_2791 0.87 -0.2
225,407 - 11159 mRNA_2791 0.89 -2.2
225,715 + -0.5
225,717 - -0.1
226,194 + 0.2
226,424 - 11160 mRNA_2792 0.19 0.3
226,426 - 11160 mRNA_2792 0.19 1.1
226,629 + 11160 mRNA_2792 0.30 0.2
226,710 - 11160 mRNA_2792 0.34 1.0
226,734 - 11160 mRNA_2792 0.35 1.1