Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2787

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2786: 11154 - Hypothetical Protein, at 209744 to 210942 11154 mRNA_2787: 11155 - KOG1848 Uncharacterized conserved protein, at 211081 to 216177 11155

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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210,107 + 11154 mRNA_2786 0.30 1.7
210,397 - 11154 mRNA_2786 0.54 -0.1
210,407 + 11154 mRNA_2786 0.55 0.1
210,431 + 11154 mRNA_2786 0.57 2.6
210,567 - 11154 mRNA_2786 0.69 2.1
210,637 - 11154 mRNA_2786 0.74 1.2
210,675 - 11154 mRNA_2786 0.78 0.6
210,683 + 11154 mRNA_2786 0.78 0.3
210,697 + 11154 mRNA_2786 0.79 1.4
210,827 + 0.9
210,830 - -0.0
210,844 + 0.5
210,948 - 2.0
210,991 + 2.5
211,000 + 1.2
211,119 + 1.7
211,251 + 0.7
211,275 + 0.9
211,376 - 0.4
211,584 + -0.4
211,728 + 11155 mRNA_2787 0.13 0.2
211,730 - 11155 mRNA_2787 0.13 0.9
211,766 + 11155 mRNA_2787 0.13 1.0
211,876 + 11155 mRNA_2787 0.16 0.3
211,886 - 11155 mRNA_2787 0.16 0.1
212,095 + 11155 mRNA_2787 0.20 -0.3
212,099 - 11155 mRNA_2787 0.20 -0.1
212,101 + 11155 mRNA_2787 0.20 1.5
212,136 + 11155 mRNA_2787 0.21 0.7
212,165 + 11155 mRNA_2787 0.21 0.4
212,243 + 11155 mRNA_2787 0.23 1.3
212,576 - 11155 mRNA_2787 0.29 0.7
212,593 - 11155 mRNA_2787 0.30 1.4
212,599 + 11155 mRNA_2787 0.30 0.7
212,950 - 11155 mRNA_2787 0.37 0.6
213,175 - 11155 mRNA_2787 0.41 0.4
213,204 + 11155 mRNA_2787 0.42 -1.8
213,351 - 11155 mRNA_2787 0.45 1.3
213,372 + 11155 mRNA_2787 0.45 2.0
213,448 - 11155 mRNA_2787 0.46 1.5
213,510 - 11155 mRNA_2787 0.48 0.7
213,593 - 11155 mRNA_2787 0.49 1.9
213,635 + 11155 mRNA_2787 0.50 1.0
213,823 + 11155 mRNA_2787 0.54 1.1
214,081 - 11155 mRNA_2787 0.59 0.7
214,184 - 11155 mRNA_2787 0.61 1.3
214,248 - 11155 mRNA_2787 0.62 1.5
214,286 + 11155 mRNA_2787 0.63 -1.2
214,505 - 11155 mRNA_2787 0.67 0.6
214,511 + 11155 mRNA_2787 0.67 1.0
214,523 - 11155 mRNA_2787 0.68 0.4
214,543 + 11155 mRNA_2787 0.68 0.5
214,891 + 11155 mRNA_2787 0.75 0.2
215,414 - 11155 mRNA_2787 0.85 -0.0
215,440 + 11155 mRNA_2787 0.86 0.5
215,444 - 11155 mRNA_2787 0.86 0.3
215,473 - 11155 mRNA_2787 0.86 1.7
215,584 + 11155 mRNA_2787 0.88 3.3
215,594 - 11155 mRNA_2787 0.89 1.5
215,606 + 11155 mRNA_2787 0.89 0.5
215,658 + 11155 mRNA_2787 0.90 0.1
215,721 - 2.5
215,738 - 0.6
215,799 + 0.7
215,868 + -0.6
215,896 - -1.8
215,913 + 0.4
215,928 + 0.2
216,181 + 0.4
216,889 - 2.0
216,900 + 0.6
216,911 - 0.2
216,933 - 0.9
216,949 + -0.3