Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2782

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2782: 11150 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 198574 to 201487 11150 mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202335 to 202970 11151

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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197,581 + -0.0
197,609 - -0.7
197,660 - 0.5
197,676 + 1.4
197,679 + -3.6
197,687 - 0.9
197,702 + -0.7
197,721 - -1.8
197,721 + 2.9
197,746 - -0.1
197,823 + -0.3
197,828 - 0.2
197,960 - 0.1
197,971 - 0.2
197,975 - -0.0
197,976 - 2.4
197,982 + -0.2
197,986 - -0.6
197,988 - 1.8
197,990 - -0.3
198,009 + 0.2
198,010 + 0.7
198,019 - 0.0
198,023 + -1.6
198,025 - -1.7
198,139 + 0.4
198,151 + 0.5
198,159 - -1.1
198,306 - -0.2
198,310 - -0.6
198,321 + 0.4
198,331 - 1.3
198,337 + 0.8
198,468 + -0.2
198,491 + -0.5
198,510 + -0.2
199,391 - 11150 mRNA_2782 0.28 -3.7
200,132 - 11150 mRNA_2782 0.53 -1.0
201,016 + 11150 mRNA_2782 0.84 0.1
201,285 - -0.3
201,566 - -0.7
201,864 - -0.2
201,867 - 0.2
201,877 - 0.2
201,878 + -0.1
201,878 + -0.2
201,894 + 1.2
202,018 - -0.0
202,020 + 1.2
202,030 + 1.7
202,038 - -0.3
202,041 + 1.4
202,042 + 0.7