Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2779

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2778: 11146 - K15264 NSUN5, WBSCR20 putative methyltransferase, at 188984 to 191295 11146 mRNA_2779: 11147 - K18278 THI5 pyrimidine precursor biosynthesis enzyme, at 191425 to 193018 11147

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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190,735 + 11146 mRNA_2778 0.76 0.2
190,941 - 11146 mRNA_2778 0.85 -0.2
190,942 + 11146 mRNA_2778 0.85 0.1
190,964 - 11146 mRNA_2778 0.86 0.9
190,970 + 11146 mRNA_2778 0.86 -0.7
191,153 - 3.2
191,153 + -0.9
191,161 + 1.0
191,319 + -0.5
191,320 - -0.8
191,348 - -0.6
191,430 - 2.5
191,441 - 0.8
191,552 + -1.8
191,580 - 1.8
191,763 + 11147 mRNA_2779 0.21 -0.2
191,794 + 11147 mRNA_2779 0.23 2.4
192,023 - 11147 mRNA_2779 0.38 0.3
192,129 + 11147 mRNA_2779 0.44 0.9
192,420 + 11147 mRNA_2779 0.62 0.5
192,733 - 11147 mRNA_2779 0.82 0.3
192,852 - 11147 mRNA_2779 0.90 -0.2
192,990 + 1.2
192,990 + 0.3
192,995 - 0.1
193,008 + 2.3
193,018 - 1.0
193,021 + 0.2
193,052 + -0.2
193,120 + 0.0
193,253 + -2.5
193,285 - 0.1
193,308 + 1.7
193,309 - 1.1
193,310 - -0.6
193,318 + -0.3
193,321 - -0.1
193,330 + -0.1
193,383 - -0.2
193,384 + -0.2
193,391 + -0.0
193,397 - -0.3
193,397 - 1.5
193,404 + -1.1
193,414 - 0.9
193,435 - 0.3
193,462 - -2.0
193,478 - -0.2
193,480 - 0.6
193,489 - -2.8
193,522 - 0.4
193,529 + 1.3
193,543 + -0.4
193,563 + -2.0
193,573 - -0.4
193,578 + 0.8
193,578 + 0.3
193,582 + -0.0
193,600 + 2.5
193,615 - 0.7
193,621 + 0.2
193,622 + -0.5
193,623 + -0.3
193,703 + 1.9
193,745 + 0.9
193,749 + -0.2
193,875 - 1.2
193,900 + -0.2