Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2755

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141143 to 143248 11122 mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143517 to 145999 11123 mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146345 to 148269 11124

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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142,882 - 11122 mRNA_2754 0.83 -0.2
142,993 - 11122 mRNA_2754 0.88 -1.0
143,013 - 11122 mRNA_2754 0.89 2.5
143,024 + 11122 mRNA_2754 0.89 1.7
143,161 - 0.9
143,170 - -0.3
143,238 + -1.9
143,324 + -1.9
143,340 - -0.3
143,466 - 0.6
143,482 + -0.1
143,809 + 11123 mRNA_2755 0.12 1.7
143,997 + 11123 mRNA_2755 0.19 0.1
144,167 + 11123 mRNA_2755 0.26 0.4
144,167 + 11123 mRNA_2755 0.26 1.0
144,328 - 11123 mRNA_2755 0.33 -0.2
144,342 - 11123 mRNA_2755 0.33 2.1
144,351 - 11123 mRNA_2755 0.34 1.7
144,379 + 11123 mRNA_2755 0.35 -1.0
144,518 + 11123 mRNA_2755 0.40 1.6
144,524 - 11123 mRNA_2755 0.41 1.5
144,601 + 11123 mRNA_2755 0.44 1.1
144,767 - 11123 mRNA_2755 0.50 1.3
144,775 - 11123 mRNA_2755 0.51 0.8
144,776 - 11123 mRNA_2755 0.51 1.3
145,058 - 11123 mRNA_2755 0.62 1.1
145,059 - 11123 mRNA_2755 0.62 -0.5
145,202 + 11123 mRNA_2755 0.68 -1.7
145,206 - 11123 mRNA_2755 0.68 0.8
145,270 + 11123 mRNA_2755 0.71 -0.0
145,499 - 11123 mRNA_2755 0.80 0.2
145,517 + 11123 mRNA_2755 0.81 1.2
145,541 + 11123 mRNA_2755 0.82 0.5
145,552 + 11123 mRNA_2755 0.82 -0.3
145,571 - 11123 mRNA_2755 0.83 2.1
145,598 - 11123 mRNA_2755 0.84 -1.5
145,643 + 11123 mRNA_2755 0.86 -0.7
145,929 + 1.0
145,951 + 1.8
146,098 + 1.9
146,100 - 1.0
146,222 - 3.4
146,266 - -0.4
146,266 + 0.5
146,269 + 1.0
146,280 - -0.3
146,284 - 0.1
146,332 + 0.1
146,406 + 1.4
146,421 - -0.0
146,445 - 0.6
146,588 + 11124 mRNA_2756 0.13 0.4
146,830 + 11124 mRNA_2756 0.25 -1.2
146,899 + 11124 mRNA_2756 0.29 -1.6