Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2716

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083 mRNA_2716: 11084 - Hypothetical Protein, at 70181 to 71077 11084 mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71439 to 72597 11085

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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69,278 + 11083 mRNA_2715 0.74 -1.8
69,392 + 11083 mRNA_2715 0.77 0.5
69,400 + 11083 mRNA_2715 0.78 -0.1
69,473 + 11083 mRNA_2715 0.80 0.4
69,553 + 11083 mRNA_2715 0.82 0.2
69,605 - 11083 mRNA_2715 0.84 -1.7
69,711 + 11083 mRNA_2715 0.87 0.4
69,741 - 11083 mRNA_2715 0.88 -0.2
69,878 - 1.1
70,150 - 1.9
70,289 + 11084 mRNA_2716 0.12 2.5
70,292 - 11084 mRNA_2716 0.12 -1.9
70,293 + 11084 mRNA_2716 0.12 -0.2
70,380 + 11084 mRNA_2716 0.22 -0.4
70,625 + 11084 mRNA_2716 0.49 0.5
70,769 + 11084 mRNA_2716 0.66 0.5
70,773 - 11084 mRNA_2716 0.66 -0.7
70,958 - 11084 mRNA_2716 0.87 -0.1
71,043 + 0.5
71,181 + -0.4
71,217 - 2.0
71,218 - -2.1
71,233 + 0.8
71,234 - -0.2
71,373 - 1.5
71,384 - 1.1
71,390 - 2.2
71,400 + 0.6
71,539 + -0.4
71,557 - 11085 mRNA_2717 0.10 -1.5
71,843 - 11085 mRNA_2717 0.35 -0.2
71,952 + 11085 mRNA_2717 0.44 -1.9