Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2701

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2701: 11069 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 37743 to 40782 11069 mRNA_2702: 11070 - BLAST TRAF-like [Xanthophyllomyces dendrorhous], at 41116 to 42334 11070

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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36,794 - 0.9
37,069 - 0.2
37,098 + 0.1
37,101 - 0.5
37,228 + -0.4
37,284 + 0.2
37,404 + 1.4
37,414 + -0.1
37,418 + 1.3
37,421 + 0.4
37,568 + 1.6
37,692 + 0.3
39,614 + 11069 mRNA_2701 0.62 1.6
40,982 + 0.7
41,019 + 0.8
41,025 + 0.5
41,027 - -0.0
41,034 - 0.9
41,056 - 0.9
41,082 - 0.0
41,198 + 2.9
41,316 + 11070 mRNA_2702 0.16 -0.8
41,582 - 11070 mRNA_2702 0.38 0.1
41,677 + 11070 mRNA_2702 0.46 0.2
41,716 + 11070 mRNA_2702 0.49 1.1
41,746 - 11070 mRNA_2702 0.52 2.8