Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2677

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2677: 11045 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 756988 to 757590 11045 mRNA_2678: 11046 - KOG3102 Uncharacterized conserved protein, at 758219 to 759317 11046

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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756,328 - 1.2
756,620 + 0.3
756,623 - 0.6
757,003 - -0.1
757,318 - 11045 mRNA_2677 0.55 0.9
757,325 + 11045 mRNA_2677 0.56 -0.0
757,355 - 11045 mRNA_2677 0.61 0.2
757,424 + 11045 mRNA_2677 0.72 0.4
757,462 - 11045 mRNA_2677 0.79 0.9
757,640 - -1.0
757,737 + 1.3
757,747 - 1.1
757,803 - 0.8
757,880 + 0.1
757,886 - 0.4
757,913 - -1.5
758,065 - 2.3
758,221 - 0.4
758,228 + -0.2
758,229 + 0.5
758,318 - -0.5
758,407 + 11046 mRNA_2678 0.17 1.5