Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2647

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2646: 11014 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058, at 667019 to 668057 11014 mRNA_2647: 11015 - Hypothetical Protein, at 668497 to 669102 11015 mRNA_2648: 11016 - SUPERFAMILY--SSF52058, at 669418 to 670426 11016

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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667,604 + 11014 mRNA_2646 0.56 -0.2
667,673 - 11014 mRNA_2646 0.63 -1.5
667,963 + 0.1
668,352 + -0.1
668,538 + 2.6
668,945 - 11015 mRNA_2647 0.74 3.0
669,110 + 1.5
669,158 - 4.3
669,166 + 1.1
669,289 - -0.4
669,306 + 1.9
669,447 + -0.0
669,594 + 11016 mRNA_2648 0.17 -0.5
669,614 - 11016 mRNA_2648 0.19 -1.6
669,866 + 11016 mRNA_2648 0.44 -1.3
669,876 - 11016 mRNA_2648 0.45 0.6
669,877 - 11016 mRNA_2648 0.45 -0.7
669,878 + 11016 mRNA_2648 0.46 0.7
669,881 - 11016 mRNA_2648 0.46 3.0
669,985 + 11016 mRNA_2648 0.56 -0.3