Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2640

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008 mRNA_2641: 11009 - Hypothetical Protein, at 658203 to 659346 11009

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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655,990 - 2.0
656,142 + 0.6
656,158 + 0.3
656,161 + 0.5
656,328 + 0.9
656,329 - 0.0
656,461 + -0.1
656,573 - 0.4
656,596 + 0.3
656,606 - -3.7
656,769 - -0.1
656,882 + -0.8
657,163 + 11008 mRNA_2640 0.21 -1.2
657,202 - 11008 mRNA_2640 0.25 1.0
657,202 + 11008 mRNA_2640 0.25 0.8
657,462 - 11008 mRNA_2640 0.52 -1.5
657,487 + 11008 mRNA_2640 0.55 1.4
657,500 - 11008 mRNA_2640 0.56 1.3
657,534 - 11008 mRNA_2640 0.60 -0.3
657,537 - 11008 mRNA_2640 0.60 0.3
657,537 - 11008 mRNA_2640 0.60 1.4
657,559 - 11008 mRNA_2640 0.62 0.8
657,563 + 11008 mRNA_2640 0.63 -0.0
657,569 - 11008 mRNA_2640 0.63 0.7
657,570 + 11008 mRNA_2640 0.63 -1.2
657,609 - 11008 mRNA_2640 0.67 0.3
657,615 + 11008 mRNA_2640 0.68 0.1
657,619 + 11008 mRNA_2640 0.68 -0.3
657,619 + 11008 mRNA_2640 0.68 -0.3
657,620 - 11008 mRNA_2640 0.69 1.1
657,636 - 11008 mRNA_2640 0.70 -0.1
657,638 + 11008 mRNA_2640 0.70 1.0
657,645 + 11008 mRNA_2640 0.71 0.4
657,682 - 11008 mRNA_2640 0.75 1.0
657,691 - 11008 mRNA_2640 0.76 1.6
657,778 - 11008 mRNA_2640 0.85 0.5
657,787 + 11008 mRNA_2640 0.86 -0.8
657,811 + 11008 mRNA_2640 0.89 1.7
657,812 - 11008 mRNA_2640 0.89 0.7
657,820 - 11008 mRNA_2640 0.89 0.0
657,832 + 0.2
657,832 + 1.2
657,857 - 1.3
657,882 - 1.5
657,883 - -0.3
657,886 - 1.4
657,898 + -0.5
657,910 - 0.9
657,914 - 0.2
657,920 - 1.6
657,920 + -1.4
657,934 - 0.5
657,939 - 0.2
657,942 + 1.3
657,953 - 0.3
657,954 + -0.9
657,975 + 1.2
657,975 - 0.8
657,995 + 0.8
657,997 - -0.1
657,997 - 0.4
657,998 - -0.1
658,000 + 0.5
658,003 - 0.3
658,008 - -0.3
658,009 - 0.2
658,018 - 1.2
658,019 - -0.5
658,020 - 1.9
658,022 - 1.8
658,043 + 1.7
658,056 - 1.5
658,130 - 1.3
658,156 - 2.5
658,161 - -0.3
658,166 + 0.5
658,192 + 1.2
658,206 - 1.4
658,287 - -0.4
658,298 - 1.7
658,309 + 1.8
658,377 - 11009 mRNA_2641 0.15 0.5
658,433 + 11009 mRNA_2641 0.20 -0.4
658,633 + 11009 mRNA_2641 0.38 0.1
658,645 + 11009 mRNA_2641 0.39 -0.8
658,769 - 11009 mRNA_2641 0.49 1.9