Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2625

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2624: 10992 - SUPERFAMILY--SSF52058, at 616981 to 618073 10992 mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618435 to 621494 10993 mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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617,504 + 10992 mRNA_2624 0.48 0.9
617,505 - 10992 mRNA_2624 0.48 0.6
617,645 - 10992 mRNA_2624 0.61 -0.4
617,725 - 10992 mRNA_2624 0.68 1.0
617,726 + 10992 mRNA_2624 0.68 0.6
617,738 + 10992 mRNA_2624 0.69 0.4
617,751 - 10992 mRNA_2624 0.70 1.5
617,759 - 10992 mRNA_2624 0.71 -0.6
617,760 - 10992 mRNA_2624 0.71 1.1
617,762 + 10992 mRNA_2624 0.71 1.1
617,770 + 10992 mRNA_2624 0.72 -0.1
617,771 + 10992 mRNA_2624 0.72 -0.4
617,771 + 10992 mRNA_2624 0.72 0.7
617,780 - 10992 mRNA_2624 0.73 0.3
617,784 + 10992 mRNA_2624 0.73 -0.2
617,786 - 10992 mRNA_2624 0.74 0.4
617,788 - 10992 mRNA_2624 0.74 1.8
617,805 - 10992 mRNA_2624 0.75 0.7
617,826 + 10992 mRNA_2624 0.77 0.8
617,844 - 10992 mRNA_2624 0.79 2.4
617,847 + 10992 mRNA_2624 0.79 0.9
617,884 + 10992 mRNA_2624 0.83 0.7
617,885 - 10992 mRNA_2624 0.83 0.1
617,911 - 10992 mRNA_2624 0.85 1.7
617,914 + 10992 mRNA_2624 0.85 1.2
617,932 - 10992 mRNA_2624 0.87 0.4
617,936 - 10992 mRNA_2624 0.87 0.5
617,964 + 0.6
617,976 + 0.8
617,976 - 0.1
617,980 + -0.0
617,988 - -0.7
617,988 - 0.2
618,008 + 0.7
618,043 + 1.3
618,069 + 0.1
618,083 + 0.6
618,084 - 1.8
618,137 - 0.6
618,140 + -0.2
618,143 + 0.7
618,187 + 0.2
618,191 - 1.0
618,193 - 0.2
618,197 - -0.4
618,203 - 1.7
618,224 + 0.4
618,245 - 0.6
618,246 - -1.4
618,246 + 2.0
618,251 + 0.7
618,257 - 0.7
618,267 - -0.1
618,268 - -0.1
618,270 - 1.4
618,276 + -0.0
618,278 - 0.8
618,281 - 1.0
618,291 - -0.1
618,296 - 1.4
618,297 + 2.1
618,297 - -0.0
618,308 - 0.1
618,313 + 0.1
618,313 + 0.2
618,314 + 0.2
618,315 - 1.4
618,316 - 1.5
618,317 + 1.2
618,319 - -0.1
618,319 + 1.2
618,319 + -0.4
618,320 + 1.5
618,326 + 1.6
618,327 - 1.4
618,334 + 0.3
618,401 - 0.9
618,410 + -0.1
618,478 + 0.4
618,483 - 1.3
618,503 + 1.6
618,519 + 0.2
618,547 + 1.1
618,623 + 0.7
618,624 - -0.4
618,630 - 0.6
618,640 + 0.8
618,650 - 0.3
618,782 + 10993 mRNA_2625 0.11 1.2
618,795 + 10993 mRNA_2625 0.12 0.6
618,798 + 10993 mRNA_2625 0.12 0.6
618,921 + 10993 mRNA_2625 0.16 -0.0
619,225 + 10993 mRNA_2625 0.26 -0.8
619,356 - 10993 mRNA_2625 0.30 -0.2
619,496 + 10993 mRNA_2625 0.35 1.2
619,693 - 10993 mRNA_2625 0.41 0.4
620,106 + 10993 mRNA_2625 0.55 -0.3
620,243 - 10993 mRNA_2625 0.59 0.3
620,248 + 10993 mRNA_2625 0.59 -0.2
620,405 + 10993 mRNA_2625 0.64 -0.1
620,530 - 10993 mRNA_2625 0.68 0.8
620,547 + 10993 mRNA_2625 0.69 1.3
620,667 - 10993 mRNA_2625 0.73 0.5
620,813 - 10993 mRNA_2625 0.78 0.0
620,819 - 10993 mRNA_2625 0.78 -0.1
620,851 + 10993 mRNA_2625 0.79 -0.5
620,975 + 10993 mRNA_2625 0.83 0.5
621,110 - 10993 mRNA_2625 0.87 0.5
621,138 + 10993 mRNA_2625 0.88 1.5
621,400 + -0.2
621,415 - -0.7
621,513 - 0.1
621,721 - 1.3
621,833 - 1.8
622,121 - 10994 mRNA_2626 0.22 -0.8
622,171 + 10994 mRNA_2626 0.25 -0.5
622,176 - 10994 mRNA_2626 0.26 0.8
622,302 + 10994 mRNA_2626 0.34 -1.0
622,347 + 10994 mRNA_2626 0.37 -0.5
622,385 + 10994 mRNA_2626 0.39 0.0
622,453 + 10994 mRNA_2626 0.44 0.2