Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2599

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2598: 10966 - Hypothetical Protein, at 566184 to 566984 10966 mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967 mRNA_2600: 10968 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 568894 to 570450 10968

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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566,548 + 10966 mRNA_2598 0.45 2.3
566,715 - 10966 mRNA_2598 0.66 -0.0
566,987 - 1.4
567,007 + 0.0
567,278 - 1.3
567,296 + 0.5
567,528 - -0.2
567,549 - -0.7
567,551 + 1.8
567,702 - 10967 mRNA_2599 0.32 1.2
567,851 - 10967 mRNA_2599 0.61 1.2
568,000 + -0.3
568,116 - 1.2
568,138 - 3.0
568,143 - 0.3
568,152 - 0.2
568,154 + 0.4
568,175 + 0.6
568,177 - 1.3
568,179 - -1.6
568,181 - 0.3
568,185 + 0.3
568,190 - 1.4
568,197 + 0.7
568,201 - 0.3
568,205 - 0.4
568,216 + -0.7
568,297 - -0.6
568,306 - -0.4
568,317 - 1.9
568,331 + 0.0
568,353 - -0.9
568,361 - 1.9
568,414 - -0.1
568,453 + -1.3
568,498 - -0.3
568,587 - -1.0
568,782 - -0.6
568,783 + 0.6
568,904 - 0.6
568,932 + 0.5
568,946 - 0.4
568,948 - 0.1
568,951 + -0.1
568,957 + -0.8
568,957 + -0.4
568,958 - -0.2
568,958 - -0.7
568,964 - -0.5
568,965 + -0.4
568,968 + -1.4
568,968 - 0.3
568,971 + 0.2
568,971 + -0.4
568,971 + 0.6
568,971 - -0.2
568,971 + -1.1
568,971 + 0.8
568,975 - -0.4
568,976 + 1.4
568,978 + 0.8
568,980 + 0.8
568,983 - 1.2
568,984 - -0.7
568,986 + 0.8
568,986 - 0.2
568,990 - -0.6
568,990 + 1.9
568,992 - 0.6
568,993 + 1.5
568,993 + 1.1
568,994 + 0.2
568,996 + -0.2
568,997 + 1.4
568,997 + 0.4
568,999 + -0.0
569,002 + -3.4
569,004 + 1.0
569,006 + -0.8
569,018 - 1.7