Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2591

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2590: 10958 - Hypothetical Protein, at 549148 to 549789 10958 mRNA_2591: 10959 - Hypothetical Protein, at 550194 to 551919 10959 mRNA_2592: 10960 - HMMPfam-Protein of unknown function (DUF1762)-PF08574, at 551978 to 553842 10960

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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549,225 - 10958 mRNA_2590 0.12 -0.1
549,239 + 10958 mRNA_2590 0.14 0.2
549,287 + 10958 mRNA_2590 0.22 -0.3
549,299 + 10958 mRNA_2590 0.24 -0.1
549,349 + 10958 mRNA_2590 0.31 -0.8
549,352 + 10958 mRNA_2590 0.32 -0.5
549,360 + 10958 mRNA_2590 0.33 0.0
549,365 - 10958 mRNA_2590 0.34 0.0
549,370 + 10958 mRNA_2590 0.35 2.5
549,373 + 10958 mRNA_2590 0.35 0.0
549,374 + 10958 mRNA_2590 0.35 0.4
549,375 - 10958 mRNA_2590 0.35 -0.5
549,378 - 10958 mRNA_2590 0.36 -0.7
549,382 + 10958 mRNA_2590 0.36 1.5
549,383 + 10958 mRNA_2590 0.37 0.4
549,385 - 10958 mRNA_2590 0.37 0.3
549,386 + 10958 mRNA_2590 0.37 0.6
549,391 + 10958 mRNA_2590 0.38 0.6
549,398 - 10958 mRNA_2590 0.39 0.2
549,400 + 10958 mRNA_2590 0.39 1.0
549,402 - 10958 mRNA_2590 0.40 -1.4
549,406 + 10958 mRNA_2590 0.40 1.3
549,412 + 10958 mRNA_2590 0.41 0.6
549,412 + 10958 mRNA_2590 0.41 0.9
549,414 + 10958 mRNA_2590 0.41 0.3
549,422 + 10958 mRNA_2590 0.43 -0.2
549,429 - 10958 mRNA_2590 0.44 0.7
549,435 + 10958 mRNA_2590 0.45 -0.7
549,435 + 10958 mRNA_2590 0.45 0.2
549,437 + 10958 mRNA_2590 0.45 0.6
549,439 - 10958 mRNA_2590 0.45 0.0
549,441 - 10958 mRNA_2590 0.46 0.0
549,442 + 10958 mRNA_2590 0.46 0.9
549,443 - 10958 mRNA_2590 0.46 0.2
549,447 + 10958 mRNA_2590 0.47 1.4
549,448 + 10958 mRNA_2590 0.47 0.2
549,448 - 10958 mRNA_2590 0.47 -0.3
549,449 + 10958 mRNA_2590 0.47 -0.6
549,449 - 10958 mRNA_2590 0.47 1.6
549,461 + 10958 mRNA_2590 0.49 -0.2
549,469 + 10958 mRNA_2590 0.50 1.2
549,469 + 10958 mRNA_2590 0.50 -0.4
549,470 + 10958 mRNA_2590 0.50 1.3
549,478 + 10958 mRNA_2590 0.51 -0.6
549,479 + 10958 mRNA_2590 0.52 -0.7
549,490 + 10958 mRNA_2590 0.53 -0.2
549,508 - 10958 mRNA_2590 0.56 0.1
549,517 - 10958 mRNA_2590 0.57 0.4
549,533 + 10958 mRNA_2590 0.60 0.4
549,543 + 10958 mRNA_2590 0.62 -0.6
549,555 + 10958 mRNA_2590 0.63 -0.3
549,574 - 10958 mRNA_2590 0.66 1.2
549,574 - 10958 mRNA_2590 0.66 -0.4
549,575 + 10958 mRNA_2590 0.67 0.9
549,577 - 10958 mRNA_2590 0.67 0.1
549,578 - 10958 mRNA_2590 0.67 0.5
549,581 - 10958 mRNA_2590 0.67 -1.1
549,583 - 10958 mRNA_2590 0.68 0.0
549,587 - 10958 mRNA_2590 0.68 -0.5
549,588 + 10958 mRNA_2590 0.69 0.6
549,593 - 10958 mRNA_2590 0.69 -0.3
549,593 + 10958 mRNA_2590 0.69 -1.7
549,594 - 10958 mRNA_2590 0.69 1.2
549,595 - 10958 mRNA_2590 0.70 1.2
549,596 + 10958 mRNA_2590 0.70 0.9
549,600 + 10958 mRNA_2590 0.70 -0.2
549,600 + 10958 mRNA_2590 0.70 -0.0
549,605 - 10958 mRNA_2590 0.71 -0.2
549,606 + 10958 mRNA_2590 0.71 0.7
549,607 + 10958 mRNA_2590 0.71 -0.3
549,612 + 10958 mRNA_2590 0.72 -0.9
549,614 + 10958 mRNA_2590 0.73 -0.1
549,629 - 10958 mRNA_2590 0.75 -0.2
549,632 + 10958 mRNA_2590 0.75 -0.9
549,639 + 10958 mRNA_2590 0.76 0.4
549,640 - 10958 mRNA_2590 0.77 -0.5
549,649 + 10958 mRNA_2590 0.78 0.7
549,651 - 10958 mRNA_2590 0.78 -0.6
549,654 - 10958 mRNA_2590 0.79 1.0
549,655 + 10958 mRNA_2590 0.79 -0.2
549,656 + 10958 mRNA_2590 0.79 0.2
549,657 + 10958 mRNA_2590 0.79 0.2
549,661 + 10958 mRNA_2590 0.80 2.1
549,661 - 10958 mRNA_2590 0.80 -0.1
549,665 - 10958 mRNA_2590 0.81 0.3
549,665 - 10958 mRNA_2590 0.81 -1.2
549,668 - 10958 mRNA_2590 0.81 0.5
549,669 + 10958 mRNA_2590 0.81 0.6
549,675 - 10958 mRNA_2590 0.82 0.1
549,677 - 10958 mRNA_2590 0.82 -0.1
549,678 - 10958 mRNA_2590 0.83 0.0
549,680 + 10958 mRNA_2590 0.83 0.3
549,685 + 10958 mRNA_2590 0.84 -0.2
549,685 + 10958 mRNA_2590 0.84 1.0
549,691 + 10958 mRNA_2590 0.85 1.8
549,704 - 10958 mRNA_2590 0.87 -1.2
549,706 + 10958 mRNA_2590 0.87 0.7
549,710 - 10958 mRNA_2590 0.88 1.1
549,715 - 10958 mRNA_2590 0.88 0.2
549,716 + 10958 mRNA_2590 0.88 -0.3
549,761 + -0.9
549,818 - 0.4
549,819 + 0.1
549,821 - -1.2
549,825 - 0.9
549,829 + 1.6
549,830 - 0.1
549,837 + -1.3
549,841 + -0.7
549,846 + 1.9
549,849 - 0.2
549,850 + 0.4
549,859 + 1.7
549,885 - 0.1
549,894 + 1.0
549,957 - -1.1
550,012 + 1.3
550,020 - 0.9
550,033 - 0.8
550,033 + -0.2
550,034 + -0.9
550,290 - 1.2
550,316 - -0.0
550,323 - -0.5
550,324 - -0.1
550,440 - 10959 mRNA_2591 0.14 -0.1
550,470 + 10959 mRNA_2591 0.16 1.7
550,614 - 10959 mRNA_2591 0.24 0.6
551,028 - 10959 mRNA_2591 0.48 -0.1
551,030 + 10959 mRNA_2591 0.48 0.3
551,042 + 10959 mRNA_2591 0.49 0.7
551,174 - 10959 mRNA_2591 0.57 0.4
551,181 - 10959 mRNA_2591 0.57 1.5
551,186 + 10959 mRNA_2591 0.57 -1.2
551,649 + 10959 mRNA_2591 0.84 -1.4
551,705 + 10959 mRNA_2591 0.88 1.5
551,797 - 0.6
551,979 + -1.0