Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2564

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2563: 10931 - Interpro F-box-like, at 454095 to 455181 10931 mRNA_2564: 10932 - SUPERFAMILY--SSF52058, at 455625 to 456615 10932 mRNA_2565: 10933 - K00799 GST, gst glutathione S-transferase, at 457320 to 458239 10933

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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454,635 - 10931 mRNA_2563 0.50 0.4
455,084 + 0.1
455,318 - 2.0
455,493 - 2.3
455,518 + 2.0
455,622 - 0.5
455,780 + 10932 mRNA_2564 0.16 0.9
456,085 - 10932 mRNA_2564 0.46 1.7
456,190 + 10932 mRNA_2564 0.57 -1.1
456,229 + 10932 mRNA_2564 0.61 -0.0
456,249 + 10932 mRNA_2564 0.63 0.8
456,381 + 10932 mRNA_2564 0.76 0.9
456,526 + 1.2
456,822 - -0.0
456,846 + 1.4
456,975 - -0.1
457,134 + 0.4
457,153 + -0.1
457,157 + 1.2
457,430 + 10933 mRNA_2565 0.12 0.7
457,540 + 10933 mRNA_2565 0.24 0.1
457,576 - 10933 mRNA_2565 0.28 -0.1