Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2562

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2561: 10929 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 446568 to 451968 10929 mRNA_2562: 10930 - Hypothetical Protein, at 452219 to 453821 10930 mRNA_2563: 10931 - Interpro F-box-like, at 454095 to 455181 10931

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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452,291 - -0.0
452,449 + 10930 mRNA_2562 0.14 1.0
452,453 - 10930 mRNA_2562 0.15 0.7
452,543 + 10930 mRNA_2562 0.20 1.2
452,606 + 10930 mRNA_2562 0.24 -0.4
452,704 - 10930 mRNA_2562 0.30 -0.6
452,798 - 10930 mRNA_2562 0.36 -0.0
453,039 + 10930 mRNA_2562 0.51 -0.1
453,102 - 10930 mRNA_2562 0.55 -0.5
453,267 - 10930 mRNA_2562 0.65 1.0
453,277 + 10930 mRNA_2562 0.66 0.4
453,284 - 10930 mRNA_2562 0.66 -0.1
453,453 - 10930 mRNA_2562 0.77 2.1
453,456 + 10930 mRNA_2562 0.77 0.4
453,579 + 10930 mRNA_2562 0.85 1.5
453,724 + 0.1
453,745 + 2.1
453,886 - 0.9
454,141 + 1.0
454,170 + 1.4
454,174 + 1.6
454,287 + 10931 mRNA_2563 0.18 -0.2
454,432 - 10931 mRNA_2563 0.31 1.7
454,477 - 10931 mRNA_2563 0.35 0.4
454,585 + 10931 mRNA_2563 0.45 0.0
454,635 - 10931 mRNA_2563 0.50 0.4