Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2557

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2556: 10924 - Hypothetical Protein, at 435593 to 437275 10924 mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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436,575 - 10924 mRNA_2556 0.58 0.7
436,757 - 10924 mRNA_2556 0.69 0.3
437,054 - 10924 mRNA_2556 0.87 0.2
437,175 + 0.7
437,449 + -0.4
437,521 + -0.4
438,247 - 10925 mRNA_2557 0.38 2.1
438,247 - 10925 mRNA_2557 0.38 1.7
438,253 + 10925 mRNA_2557 0.39 2.5
438,253 + 10925 mRNA_2557 0.39 -1.6
438,253 - 10925 mRNA_2557 0.39 0.6
438,319 - 10925 mRNA_2557 0.42 -0.4
438,575 - 10925 mRNA_2557 0.57 1.2
438,662 - 10925 mRNA_2557 0.62 0.7
438,832 - 10925 mRNA_2557 0.71 -1.6
438,962 - 10925 mRNA_2557 0.78 0.5
439,070 - 10925 mRNA_2557 0.84 -0.3
439,070 - 10925 mRNA_2557 0.84 3.2
439,273 - -0.0
439,301 - 0.8
439,994 + 10926 mRNA_2558 0.41 1.3
440,130 - 10926 mRNA_2558 0.52 0.7