Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2531

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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371,550 + 0.3
371,642 + 0.1
371,663 - 1.8
371,667 + 0.1
371,813 + 1.1
371,927 - 0.9
371,932 - -1.7
371,943 - 0.1
371,943 - -0.2
371,948 - 1.9
371,956 - 1.9
372,111 + 0.3
372,135 - 0.3
372,512 - -0.6
372,997 - 10899 mRNA_2531 0.23 -0.1
373,027 + 10899 mRNA_2531 0.24 1.6
373,157 + 10899 mRNA_2531 0.28 -1.2
373,399 - 10899 mRNA_2531 0.36 -0.7
373,667 + 10899 mRNA_2531 0.45 1.6
373,737 - 10899 mRNA_2531 0.47 -0.7
374,341 - 10899 mRNA_2531 0.66 -0.1
374,774 + 10899 mRNA_2531 0.80 0.0
375,306 + 0.7
375,339 + 1.3
375,345 - -0.1
375,473 - 1.2
375,501 + 1.7
375,506 + 0.3
375,561 - 1.2