Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2529

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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365,991 - 10896 mRNA_2528 0.54 1.3
366,085 + 10896 mRNA_2528 0.59 1.2
366,710 + 0.2
367,018 - 1.2
367,274 - 10897 mRNA_2529 0.19 -0.8
367,460 - 10897 mRNA_2529 0.30 2.2
367,469 + 10897 mRNA_2529 0.30 0.9
367,690 - 10897 mRNA_2529 0.43 2.9
367,720 - 10897 mRNA_2529 0.45 1.0
367,759 - 10897 mRNA_2529 0.47 1.9
367,842 + 10897 mRNA_2529 0.52 2.4
367,871 + 10897 mRNA_2529 0.54 0.2
367,922 - 10897 mRNA_2529 0.57 -0.2
367,996 + 10897 mRNA_2529 0.61 2.2
367,996 + 10897 mRNA_2529 0.61 1.5
367,997 - 10897 mRNA_2529 0.61 0.8
368,122 + 10897 mRNA_2529 0.68 0.4
368,172 - 10897 mRNA_2529 0.71 1.2
368,180 + 10897 mRNA_2529 0.71 0.5
368,213 - 10897 mRNA_2529 0.73 -2.3
368,219 - 10897 mRNA_2529 0.74 -0.7
368,287 - 10897 mRNA_2529 0.78 -0.4
368,747 - 0.1
368,761 + 0.6
368,772 + 2.8
369,193 + 10898 mRNA_2530 0.14 1.2
369,440 + 10898 mRNA_2530 0.29 1.7
369,446 + 10898 mRNA_2530 0.29 0.4
369,574 - 10898 mRNA_2530 0.37 1.5
369,653 - 10898 mRNA_2530 0.41 -0.4