Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2526

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2525: 10893 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 354865 to 358254 10893 mRNA_2526: 10894 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 358856 to 360952 10894

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
358,009 - -2.2
358,013 - 0.4
358,021 - 1.4
358,046 + 0.1
358,144 - -0.2
358,213 + 3.0
358,307 - 1.1
358,336 + 1.0
358,384 + 0.4
358,387 - 0.7
358,447 + -0.4
358,462 - 2.5
358,530 - 1.4
358,577 + 0.6
358,593 + -0.5
358,599 - 0.7
358,613 - -0.5
358,653 - 0.2
358,680 + -1.4
358,692 - 0.3
358,766 - 1.0
358,994 + 3.8
359,140 - 10894 mRNA_2526 0.14 0.2
359,216 + 10894 mRNA_2526 0.17 -0.3
359,547 + 10894 mRNA_2526 0.33 -0.6
359,648 + 10894 mRNA_2526 0.38 -0.3
359,651 + 10894 mRNA_2526 0.38 0.9
359,831 + 10894 mRNA_2526 0.46 -0.1
359,835 + 10894 mRNA_2526 0.47 0.2
359,900 - 10894 mRNA_2526 0.50 -1.2
359,907 - 10894 mRNA_2526 0.50 1.5
359,907 - 10894 mRNA_2526 0.50 1.7
359,962 - 10894 mRNA_2526 0.53 -0.0
359,964 + 10894 mRNA_2526 0.53 3.1
359,996 + 10894 mRNA_2526 0.54 4.8
360,074 - 10894 mRNA_2526 0.58 -0.4
360,082 - 10894 mRNA_2526 0.58 -0.1
360,176 - 10894 mRNA_2526 0.63 -1.1
360,261 + 10894 mRNA_2526 0.67 -0.5
360,275 - 10894 mRNA_2526 0.68 -0.7
360,379 + 10894 mRNA_2526 0.73 0.6
360,381 - 10894 mRNA_2526 0.73 0.5
361,318 - -0.8
361,587 + -0.7
361,946 + -0.8