Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2519

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2519: 10887 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 342708 to 344522 10887 mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345046 to 346549 10888

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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341,992 + 1.3
342,006 + 1.6
342,029 - -0.5
342,076 - 1.0
342,085 - -0.4
342,087 - -1.2
342,094 + 1.8
342,147 + 0.3
342,165 - 0.4
342,167 + 0.1
342,168 + 0.9
342,179 - 1.8
342,191 - 0.4
342,198 + 0.5
342,214 - 0.8
342,217 - 0.1
342,293 - 0.6
342,298 - -0.2
342,298 - 0.6
342,302 + 1.0
342,302 - 1.3
342,302 + 1.1
342,337 + 0.4
342,341 + -1.0
342,341 + -0.9
342,344 + -0.2
342,355 + -1.5
342,430 + -0.7
342,603 + -1.3
342,707 + -1.5
342,882 - 1.6
343,002 - 10887 mRNA_2519 0.16 -0.1
343,184 - 10887 mRNA_2519 0.26 -0.5
343,331 + 10887 mRNA_2519 0.34 0.5
343,340 - 10887 mRNA_2519 0.35 2.4
343,434 + 10887 mRNA_2519 0.40 -0.4
343,758 - 10887 mRNA_2519 0.58 1.1
344,049 - 10887 mRNA_2519 0.74 0.7
344,212 + 10887 mRNA_2519 0.83 0.8
344,385 + -1.0
344,387 - -0.3
344,664 - -1.0
344,680 - 0.4
344,688 + -0.0
344,774 - -2.2
344,814 + -1.1
344,831 - -1.4
344,968 + -0.1
345,099 - -0.2
345,142 - -0.9
345,355 - 10888 mRNA_2520 0.21 0.1
345,406 - 10888 mRNA_2520 0.24 -1.3
345,420 + 10888 mRNA_2520 0.25 -0.5