Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2504

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2504: 10872 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 309895 to 311581 10872 mRNA_2505: 10873 - KOG3299 Uncharacterized conserved protein, at 311631 to 312608 10873

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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308,971 + 2.8
308,971 - 1.0
308,993 - -0.6
308,999 + -0.6
309,104 - -0.0
309,134 + -0.7
309,184 + 2.4
309,281 + 3.5
309,441 + 0.1
309,560 + -0.1
309,839 - 2.1
310,443 + 10872 mRNA_2504 0.32 0.0
310,631 + 10872 mRNA_2504 0.44 -0.0
310,754 - 10872 mRNA_2504 0.51 1.1
310,872 - 10872 mRNA_2504 0.58 0.1
310,919 - 10872 mRNA_2504 0.61 0.3
311,187 + 10872 mRNA_2504 0.77 1.0
311,188 + 10872 mRNA_2504 0.77 0.5
311,529 + 2.2
311,620 - -0.2
311,769 + 10873 mRNA_2505 0.14 -0.2
312,350 - 10873 mRNA_2505 0.74 1.1
312,469 + 10873 mRNA_2505 0.86 1.3