Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2487

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854 mRNA_2487: 10855 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 264187 to 266262 10855

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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263,407 - 10854 mRNA_2486 0.68 0.2
263,438 - 10854 mRNA_2486 0.72 -0.1
263,596 - 0.7
263,706 + -0.4
263,992 - 0.5
264,506 + 10855 mRNA_2487 0.15 -0.4
264,561 - 10855 mRNA_2487 0.18 0.1
264,651 - 10855 mRNA_2487 0.22 2.3
265,086 + 10855 mRNA_2487 0.43 -0.1
265,713 - 10855 mRNA_2487 0.74 1.2
266,215 - -1.1
266,341 + 0.5
266,850 - -0.2
267,068 - 0.6