Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2475

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234258 to 235956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236278 to 238719 10843

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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235,296 - 10842 mRNA_2474 0.61 0.4
235,303 - 10842 mRNA_2474 0.62 0.3
235,346 + 10842 mRNA_2474 0.64 1.2
235,725 - 10842 mRNA_2474 0.86 2.4
235,738 - 10842 mRNA_2474 0.87 0.5
236,183 - -1.0
236,291 + 0.3
236,410 - 1.7
236,472 - 0.0
236,473 + -0.8
236,488 + 1.7
236,843 - 10843 mRNA_2475 0.23 -0.7
237,037 - 10843 mRNA_2475 0.31 0.8
237,445 + 10843 mRNA_2475 0.48 -2.5
237,697 - 10843 mRNA_2475 0.58 0.0
238,079 - 10843 mRNA_2475 0.74 0.6
238,132 + 10843 mRNA_2475 0.76 0.2
238,338 + 10843 mRNA_2475 0.84 1.1
238,589 - -0.0
238,589 - 0.6
238,647 + -0.1
238,648 - 0.8
238,948 - -0.5
238,993 + -1.3
239,035 - -0.6
239,047 - 0.2
239,300 + 0.6