Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2463

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2462: 10830 - SUPERFAMILY--SSF52047, at 198885 to 199828 10830 mRNA_2463: 10831 - Hypothetical Protein, at 200051 to 202030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202806 to 204474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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199,095 + 10830 mRNA_2462 0.22 1.2
199,105 - 10830 mRNA_2462 0.23 0.6
199,540 - 10830 mRNA_2462 0.69 0.6
199,847 - 1.1
199,858 + 1.9
200,319 + 10831 mRNA_2463 0.14 -0.2
200,363 - 10831 mRNA_2463 0.16 1.5
200,441 - 10831 mRNA_2463 0.20 0.6
200,477 + 10831 mRNA_2463 0.22 -0.1
200,553 - 10831 mRNA_2463 0.25 -2.2
201,059 - 10831 mRNA_2463 0.51 1.9
201,612 - 10831 mRNA_2463 0.79 -0.2
201,635 + 10831 mRNA_2463 0.80 -0.1
201,639 + 10831 mRNA_2463 0.80 0.7
201,681 + 10831 mRNA_2463 0.82 -0.1
201,795 - 10831 mRNA_2463 0.88 1.7
201,803 - 10831 mRNA_2463 0.88 0.2
201,958 + 0.8
202,094 + 0.2
202,109 + -0.7
202,117 - -0.1
202,127 - -0.2
202,215 - 0.5
202,218 + -0.3
202,244 - 2.8
202,252 - 1.2
202,255 + 0.1
202,256 - -0.0
202,264 + 2.5
202,266 - -0.5
202,270 - 1.3
202,270 + 1.0
202,279 + -0.2
202,279 - 0.6
202,279 - -0.2
202,282 - 2.5
202,288 + 0.3
202,288 + 1.1
202,328 + -0.6
202,329 - 0.7
202,362 - -0.3
202,376 - 1.9
202,376 - 2.0
202,378 + 3.5
202,378 - 2.4
202,380 - -0.3
202,424 + 2.4
202,427 + 0.3
202,432 - 1.0
202,434 + -0.1
202,439 + -1.8
202,442 - -0.5
202,442 + 0.7
202,444 + 0.5
202,447 + -0.6
202,449 + 0.9
202,450 - 1.1
202,452 + -0.1
202,452 + 0.4
202,458 + -0.6
202,461 - 0.2
202,462 + 1.3
202,465 + -0.2
202,465 - 0.5
202,474 + 0.2
202,476 + 0.6
202,488 + 2.0
202,489 + 0.1
202,491 + -0.3
202,493 + 1.0
202,499 - 0.5
202,501 - 0.1
202,502 + 1.1
202,507 - 0.3
202,520 + 2.5
202,524 + -0.2
202,524 + 1.4
202,525 - -0.4
202,535 - -0.1
202,544 + -0.6
202,546 - -0.8
202,552 - 1.1
202,562 + -0.9
202,580 - 0.9
202,594 + 0.1
202,597 - 0.2
202,625 - -0.5
202,680 - 1.3
202,683 + 0.5
202,695 + 1.5
202,705 - 0.6
202,716 - -0.8
202,730 + -1.1
202,733 - 1.9
202,744 - -0.1
202,769 + 0.6