Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2460

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2459: 10827 - KOG2747 Histone acetyltransferase (MYST family), at 186043 to 188568 10827 mRNA_2460: 10828 - SUPERFAMILY--SSF57997, at 188946 to 195534 10828 mRNA_2461: 10829 - Hypothetical Protein, at 195673 to 198074 10829

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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188,411 - 2.8
188,726 + 0.9
188,739 - 0.3
188,751 + -0.2
188,779 + -0.5
188,926 + -0.5
189,378 + 0.0
189,540 + -1.8
189,543 - 0.6
190,044 + 10828 mRNA_2460 0.17 0.2
190,075 + 10828 mRNA_2460 0.17 1.4
190,098 - 10828 mRNA_2460 0.17 0.5
190,098 - 10828 mRNA_2460 0.17 1.2
190,247 + 10828 mRNA_2460 0.20 2.0
190,650 + 10828 mRNA_2460 0.26 0.1
191,056 + 10828 mRNA_2460 0.32 -1.6
191,480 - 10828 mRNA_2460 0.38 -0.1
191,507 + 10828 mRNA_2460 0.39 -3.0
191,526 - 10828 mRNA_2460 0.39 -0.8
191,834 + 10828 mRNA_2460 0.44 -1.5
192,625 - 10828 mRNA_2460 0.56 1.9
192,898 - 10828 mRNA_2460 0.60 0.3
192,965 + 10828 mRNA_2460 0.61 1.7
193,082 - 10828 mRNA_2460 0.63 0.3
193,261 + 10828 mRNA_2460 0.65 0.5
193,995 - 10828 mRNA_2460 0.77 0.9
194,271 - 10828 mRNA_2460 0.81 -0.2
194,278 - 10828 mRNA_2460 0.81 -0.2
194,525 - 10828 mRNA_2460 0.85 0.3
194,711 + 10828 mRNA_2460 0.87 0.8
196,114 + 10829 mRNA_2461 0.18 0.6