Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2398

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2397: 10765 - Hypothetical Protein, at 21326 to 23910 10765 mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24008 to 25280 10766 mRNA_2399: 10767 - Hypothetical Protein, at 25510 to 29581 10767

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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23,076 - 10765 mRNA_2397 0.68 1.1
23,087 - 10765 mRNA_2397 0.68 0.1
23,205 - 10765 mRNA_2397 0.73 -0.3
23,224 - 10765 mRNA_2397 0.73 -0.3
23,495 - 10765 mRNA_2397 0.84 0.2
23,667 - 0.6
23,682 + 0.1
23,780 - 0.9
23,789 + 0.6
23,790 + 0.2
23,814 + 2.9
23,941 - 1.1
23,953 + 1.3
23,955 + -0.7
24,014 + 0.3
24,021 + 1.2
24,121 + 1.7
24,133 - 1.6
24,145 + 10766 mRNA_2398 0.11 0.6
24,169 - 10766 mRNA_2398 0.13 -0.1
24,440 - 10766 mRNA_2398 0.34 1.9
24,579 - 10766 mRNA_2398 0.45 0.1
24,581 - 10766 mRNA_2398 0.45 0.5
24,720 - 10766 mRNA_2398 0.56 2.1
24,750 + 10766 mRNA_2398 0.58 0.3
24,773 + 10766 mRNA_2398 0.60 1.0
24,856 - 10766 mRNA_2398 0.67 0.7
24,895 + 10766 mRNA_2398 0.70 0.2
24,895 + 10766 mRNA_2398 0.70 1.9
25,005 - 10766 mRNA_2398 0.78 0.9
25,028 + 10766 mRNA_2398 0.80 0.4
25,164 + -0.9
25,306 + 0.4
25,422 + -0.5
25,454 - 1.0
25,493 - 0.0
25,693 + 1.9
25,696 - 0.4
25,750 - 0.4
25,857 + 2.5
26,023 + 10767 mRNA_2399 0.13 0.3