Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2386

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2385: 10753 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 765791 to 769298 10753 mRNA_2386: 10754 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 769770 to 774280 10754 mRNA_2387: 10755 - K17781 TIM13 mitochondrial import inner membrane translocase subunit TIM13, at 774477 to 775750 10755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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769,065 - 0.4
769,553 - 1.0
769,575 - 1.4
769,576 + -0.2
769,618 + 0.0
769,619 + 2.3
769,751 + -0.1
769,751 + 0.8
769,755 + 0.6
770,055 + 2.9
770,191 - -1.1
770,788 - 10754 mRNA_2386 0.23 0.7
771,048 + 10754 mRNA_2386 0.28 1.3
771,095 - 10754 mRNA_2386 0.29 2.4
771,936 + 10754 mRNA_2386 0.48 0.5
772,531 - 10754 mRNA_2386 0.61 1.2
772,534 - 10754 mRNA_2386 0.61 -0.0
773,378 + 10754 mRNA_2386 0.80 0.2
773,553 + 10754 mRNA_2386 0.84 0.4
773,580 + 10754 mRNA_2386 0.84 0.0
774,285 - 0.7
774,323 + 1.2
774,501 + -0.0
774,883 - 10755 mRNA_2387 0.32 -0.2
774,884 + 10755 mRNA_2387 0.32 -0.5
775,177 - 10755 mRNA_2387 0.55 -1.3
775,260 + 10755 mRNA_2387 0.61 1.9