Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2267

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2265: 10633 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 486068 to 487753 10633 mRNA_2266: 10634 - Hypothetical Protein, at 487843 to 488421 10634 mRNA_2267: 10635 - K15110 SLC25A21, ODC solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21, at 488523 to 490039 10635 mRNA_2268: 10636 - K11215 STE12 transcription factor STE12, at 490121 to 491043 10636

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
488,426 - 0.9
488,426 - -1.5
488,429 - -0.1
488,433 - 0.1
488,435 - 1.4
488,448 - -0.8
488,453 + 0.7
488,460 - 1.8
488,461 - 1.6
488,463 + 1.6
488,465 + 2.6
488,474 - 0.6
488,483 + 0.1
488,608 + -0.4
488,612 - 0.4
488,624 + -0.5
488,761 + 10635 mRNA_2267 0.16 -0.8
488,762 + 10635 mRNA_2267 0.16 1.0
488,762 + 10635 mRNA_2267 0.16 1.0
488,775 + 10635 mRNA_2267 0.17 -0.8
488,904 - 10635 mRNA_2267 0.25 -0.6
488,940 - 10635 mRNA_2267 0.27 -0.3
489,078 + 10635 mRNA_2267 0.37 -0.4
489,495 - 10635 mRNA_2267 0.64 -2.3
489,666 + 10635 mRNA_2267 0.75 -0.5
489,879 - 10635 mRNA_2267 0.89 0.5
490,072 + -0.1
490,197 + -0.9
490,208 - 1.1
490,361 - 10636 mRNA_2268 0.26 -0.2
490,362 + 10636 mRNA_2268 0.26 -0.5
490,517 - 10636 mRNA_2268 0.43 -1.5
490,649 - 10636 mRNA_2268 0.57 -0.4
490,658 + 10636 mRNA_2268 0.58 2.5
490,790 - 10636 mRNA_2268 0.72 1.3
490,798 - 10636 mRNA_2268 0.73 -1.7
490,850 - 10636 mRNA_2268 0.79 0.2
490,932 + 10636 mRNA_2268 0.88 2.2
490,944 - 10636 mRNA_2268 0.89 0.4
490,952 - -0.0
490,965 + 0.3