Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2181

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278274 to 281386 10549

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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277,633 + -0.2
277,642 - 0.4
277,650 - 0.2
277,665 + 0.5
278,073 + 0.1
278,075 + 0.0
278,085 + 0.0
278,129 + 0.2
278,383 - 0.8
278,385 - -0.7
278,490 + 2.9
278,510 - -0.0
278,516 + -0.8
278,528 - 2.2
278,531 - 0.0
278,784 - 10549 mRNA_2181 0.16 1.4
278,841 + 10549 mRNA_2181 0.18 -1.1
279,128 - 10549 mRNA_2181 0.27 0.1
279,249 + 10549 mRNA_2181 0.31 1.9
279,449 - 10549 mRNA_2181 0.38 1.5
279,515 - 10549 mRNA_2181 0.40 0.8
279,528 + 10549 mRNA_2181 0.40 1.0
279,994 - 10549 mRNA_2181 0.55 0.2
280,115 - 10549 mRNA_2181 0.59 -1.0
280,144 + 10549 mRNA_2181 0.60 0.9
280,165 + 10549 mRNA_2181 0.61 0.3
280,173 - 10549 mRNA_2181 0.61 -0.2
280,400 - 10549 mRNA_2181 0.68 -0.1
280,556 - 10549 mRNA_2181 0.73 0.1
280,579 + 10549 mRNA_2181 0.74 -1.2
280,871 - 10549 mRNA_2181 0.83 0.6
281,110 + 0.8
281,340 + -1.3
281,364 - 0.0
281,396 - 0.7
281,408 + 0.4
281,418 - 2.4
281,451 - 1.7
281,469 + 0.8
281,476 - 2.8
281,479 + 1.4
281,486 - -0.0
281,488 + 0.3
281,498 + -0.5
281,499 + -0.9
281,515 - -0.0
281,748 + 0.9
281,795 - 0.1
281,801 - 0.5
281,924 - 0.3
282,256 + 1.4
282,373 - 0.1
282,379 + 0.1