Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2180

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2179: 10547 - K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures, at 268224 to 273308 10547 mRNA_2180: 10548 - KOG0166 Karyopherin (importin) alpha, at 273943 to 276215 10548

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
273,226 - 0.7
273,232 - -0.6
273,263 - -0.1
273,374 - -0.2
273,402 + 0.1
273,529 - -0.3
273,531 - -0.1
273,542 + -0.1
273,560 + 0.6
273,565 - -0.1
273,566 + 0.1
273,846 + -0.2
274,173 - 10548 mRNA_2180 0.10 0.7
274,231 - 10548 mRNA_2180 0.13 -0.2
274,389 - 10548 mRNA_2180 0.20 0.1
274,397 + 10548 mRNA_2180 0.20 -2.2
274,558 + 10548 mRNA_2180 0.27 -0.2
274,563 - 10548 mRNA_2180 0.27 1.2
274,982 - 10548 mRNA_2180 0.46 -0.2
275,126 - 10548 mRNA_2180 0.52 -0.0
275,178 - 10548 mRNA_2180 0.54 -3.5
275,236 - 10548 mRNA_2180 0.57 -0.5
275,410 + 10548 mRNA_2180 0.65 -0.4
275,820 - 10548 mRNA_2180 0.83 -0.1
276,122 - 0.7
276,272 - 1.0
276,289 + 1.6
276,316 - 1.5
276,330 - -1.1
276,456 - -0.7
276,881 - -0.5
276,899 + 1.3