Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2146

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183733 to 185513 10513 mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185762 to 187254 10514 mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187353 to 188300 10515

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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184,776 + 10513 mRNA_2145 0.59 -0.4
184,855 + 10513 mRNA_2145 0.63 0.9
184,868 + 10513 mRNA_2145 0.64 0.0
184,875 + 10513 mRNA_2145 0.64 1.0
184,955 + 10513 mRNA_2145 0.69 0.2
184,989 + 10513 mRNA_2145 0.71 0.0
185,050 - 10513 mRNA_2145 0.74 0.2
185,151 + 10513 mRNA_2145 0.80 1.7
185,162 - 10513 mRNA_2145 0.80 2.0
185,163 + 10513 mRNA_2145 0.80 0.7
185,185 - 10513 mRNA_2145 0.82 -0.2
185,195 + 10513 mRNA_2145 0.82 1.1
185,249 - 10513 mRNA_2145 0.85 -2.6
185,253 + 10513 mRNA_2145 0.85 1.5
185,316 + 10513 mRNA_2145 0.89 0.3
185,439 + -0.3
185,507 - -0.2
185,656 + 0.0
185,681 - 1.3
185,718 - -1.4
185,720 + -0.4
185,759 - -0.1
185,759 - -0.3
185,835 + -0.0
185,871 + 2.3
185,921 - 10514 mRNA_2146 0.11 -1.5
185,972 + 10514 mRNA_2146 0.14 -1.8
185,982 - 10514 mRNA_2146 0.15 2.0
186,136 + 10514 mRNA_2146 0.25 -1.6
186,415 - 10514 mRNA_2146 0.44 -0.3
186,469 - 10514 mRNA_2146 0.47 -0.9
186,755 - 10514 mRNA_2146 0.67 -0.3
187,176 + 0.2
187,183 - -0.7
187,186 - 2.0