Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2136

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150841 to 152742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153030 to 154707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155364 to 157707 10505

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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152,197 + 10503 mRNA_2135 0.71 0.1
152,238 - 10503 mRNA_2135 0.73 0.5
152,282 + 10503 mRNA_2135 0.76 -0.9
152,360 - 10503 mRNA_2135 0.80 0.5
152,650 + -0.1
152,654 - 0.7
152,664 - -0.2
152,690 - -0.4
152,693 + 0.6
152,700 + 2.1
152,764 + 0.7
152,808 - 0.2
153,117 - -1.7
153,269 + 10504 mRNA_2136 0.14 0.1
153,307 - 10504 mRNA_2136 0.17 0.8
153,666 - 10504 mRNA_2136 0.38 1.6
153,673 - 10504 mRNA_2136 0.38 -0.5
153,721 - 10504 mRNA_2136 0.41 -0.0
153,826 - 10504 mRNA_2136 0.47 0.2
153,833 + 10504 mRNA_2136 0.48 0.8
153,845 + 10504 mRNA_2136 0.49 1.2
153,859 - 10504 mRNA_2136 0.49 -2.0
153,866 + 10504 mRNA_2136 0.50 -0.9
153,866 + 10504 mRNA_2136 0.50 -0.1
153,867 + 10504 mRNA_2136 0.50 0.9
153,966 - 10504 mRNA_2136 0.56 0.8
153,984 - 10504 mRNA_2136 0.57 0.7
154,391 - 10504 mRNA_2136 0.81 1.0
154,446 - 10504 mRNA_2136 0.84 -0.3
154,688 - -1.3
154,839 - -0.1
155,435 + 1.2
155,436 - -0.2
155,442 + -0.8
155,451 - 1.7
155,562 - 1.3