Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2104

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2103: 10471 - Hypothetical Protein, at 80514 to 81311 10471 mRNA_2104: 10472 - KOG0101 Molecular chaperones HSP70/HSC70, HSP70 superfamily, at 81364 to 84462 10472 mRNA_2105: 10473 - K17991 PXG peroxygenase, at 85042 to 86447 10473

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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80,372 + -0.1
80,794 - 10471 mRNA_2103 0.35 -1.2
80,825 - 10471 mRNA_2103 0.39 0.7
80,825 - 10471 mRNA_2103 0.39 -0.1
80,825 - 10471 mRNA_2103 0.39 -1.5
80,960 + 10471 mRNA_2103 0.56 -1.2
80,969 + 10471 mRNA_2103 0.57 0.0
81,096 + 10471 mRNA_2103 0.73 -0.9
81,102 - 10471 mRNA_2103 0.74 0.0
81,107 + 10471 mRNA_2103 0.74 0.7
81,108 - 10471 mRNA_2103 0.74 0.8
81,111 - 10471 mRNA_2103 0.75 -0.3
81,128 + 10471 mRNA_2103 0.77 -0.3
81,138 + 10471 mRNA_2103 0.78 0.8
81,190 + 10471 mRNA_2103 0.85 0.2
81,450 + 1.2
81,536 + 0.1
81,772 + 10472 mRNA_2104 0.13 0.8
81,831 - 10472 mRNA_2104 0.15 -0.8
81,838 + 10472 mRNA_2104 0.15 0.5
81,857 - 10472 mRNA_2104 0.16 0.5
81,909 - 10472 mRNA_2104 0.18 0.7
81,991 - 10472 mRNA_2104 0.20 -0.2
82,022 + 10472 mRNA_2104 0.21 -0.5
82,238 + 10472 mRNA_2104 0.28 0.9
82,255 - 10472 mRNA_2104 0.29 1.5
82,420 - 10472 mRNA_2104 0.34 -1.2
82,689 - 10472 mRNA_2104 0.43 -0.3
82,752 + 10472 mRNA_2104 0.45 -0.6
82,826 + 10472 mRNA_2104 0.47 -0.4
82,874 + 10472 mRNA_2104 0.49 -0.1
83,307 + 10472 mRNA_2104 0.63 1.6
83,433 - 10472 mRNA_2104 0.67 0.2
83,596 + 10472 mRNA_2104 0.72 -0.1
83,750 + 10472 mRNA_2104 0.77 1.3
83,773 - 10472 mRNA_2104 0.78 0.8
83,842 + 10472 mRNA_2104 0.80 0.6
84,198 + 2.1
84,324 + 0.5
84,337 - 0.6
84,393 - 0.8
84,680 + 0.0
85,054 - 2.0
85,227 + 10473 mRNA_2105 0.13 -0.3