Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2082

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2081: 10449 - BLAST 163.m06341p [Cryptococcus neoformans], at 25578 to 27560 10449 mRNA_2082: 10450 - Hypothetical Protein, at 27894 to 29242 10450

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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27,021 + 10449 mRNA_2081 0.73 -1.3
27,045 + 10449 mRNA_2081 0.74 1.3
27,196 - 10449 mRNA_2081 0.82 1.1
27,445 - 1.4
27,469 - 0.8
27,480 + -0.3
27,512 + 0.4
27,564 + -0.3
27,623 - 1.1
27,624 - 0.4
27,741 + 3.7
27,745 - 0.3
27,752 - 0.5
27,791 + -0.8
27,813 - -0.7
27,818 + 0.8
27,828 + 1.3
27,910 - 2.1
27,987 - 1.1
28,096 + 10450 mRNA_2082 0.15 -1.6
28,099 - 10450 mRNA_2082 0.15 1.2
28,258 + 10450 mRNA_2082 0.27 0.9
28,415 - 10450 mRNA_2082 0.39 1.3
28,553 - 10450 mRNA_2082 0.49 0.2
28,789 - 10450 mRNA_2082 0.66 1.8
28,953 - 10450 mRNA_2082 0.79 1.4
29,113 - -0.4
29,256 + 0.5
29,512 + -1.2
29,516 - 0.4
29,525 - -0.3
29,526 + -0.1
29,530 + 0.3
29,532 - 0.4
29,535 - -1.2
29,551 - 0.8
29,700 - 0.0
29,708 + 1.0
29,710 + -0.3
29,711 + 0.5
29,738 + -0.2
29,818 - 0.7
29,851 + 0.0
29,867 + 0.5
29,886 - 0.7