Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2051

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835073 to 836370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836699 to 837795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838709 to 841749 10420

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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836,326 + -0.7
836,519 - 0.3
836,541 + 0.5
836,542 - 1.5
836,680 - -1.1
836,819 - 10419 mRNA_2051 0.11 -0.4
836,856 + 10419 mRNA_2051 0.14 0.4
837,095 - 10419 mRNA_2051 0.36 0.7
837,140 + 10419 mRNA_2051 0.40 0.4
837,447 + 10419 mRNA_2051 0.68 0.8
837,538 - 10419 mRNA_2051 0.76 1.9
837,827 - 1.2
837,959 - 2.1
838,000 - 1.9
838,130 + 0.7
838,279 - 0.1
838,309 + 0.9
838,414 + 1.0
838,483 + 1.3
838,535 - 2.1
838,538 + -0.3
838,568 - -1.3
838,569 + 0.4
838,570 + 1.3
838,571 + -1.2
838,571 + 1.9
838,572 + -0.4
838,579 + -1.1
838,580 + 0.6
838,583 + -1.4
838,587 + 0.3
838,595 + -0.1
838,596 + -1.5
838,597 + -0.7
838,760 + -0.9