Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2046

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413 mRNA_2046: 10414 - Hypothetical Protein, at 826363 to 829699 10414 mRNA_2047: 10415 - HMMPfam-Spo12 family-PF05032, at 830118 to 830933 10415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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825,381 - 10413 mRNA_2045 0.47 1.4
825,485 + 10413 mRNA_2045 0.56 1.4
825,712 + 10413 mRNA_2045 0.78 1.0
825,739 - 10413 mRNA_2045 0.80 0.2
825,761 + 10413 mRNA_2045 0.82 0.5
825,978 - 1.7
825,996 + 1.9
826,284 - -0.6
826,315 - 0.2
826,322 + -0.3
826,329 - -1.8
826,337 + 0.4
826,337 - -0.1
826,341 - -0.0
826,359 - 0.2
826,361 + 0.2
826,362 - -0.0
826,406 + 0.7
826,497 - -0.9
826,567 + -0.3
826,662 - 0.1
826,878 - 10414 mRNA_2046 0.15 0.5
826,917 + 10414 mRNA_2046 0.17 -1.4
826,961 + 10414 mRNA_2046 0.18 -0.3
827,164 + 10414 mRNA_2046 0.24 -1.4
827,212 + 10414 mRNA_2046 0.25 0.9
827,255 + 10414 mRNA_2046 0.27 -0.6
827,375 - 10414 mRNA_2046 0.30 0.2
827,577 + 10414 mRNA_2046 0.36 -0.1
828,220 + 10414 mRNA_2046 0.56 0.7
828,258 - 10414 mRNA_2046 0.57 1.8
828,396 + 10414 mRNA_2046 0.61 0.3
828,549 + 10414 mRNA_2046 0.66 -0.1
828,563 - 10414 mRNA_2046 0.66 1.8
828,853 - 10414 mRNA_2046 0.75 0.3
829,080 + 10414 mRNA_2046 0.81 0.4
829,118 - 10414 mRNA_2046 0.83 1.1
829,123 + 10414 mRNA_2046 0.83 -0.7
829,247 - 10414 mRNA_2046 0.86 0.8
829,248 + 10414 mRNA_2046 0.86 0.6
829,311 + 10414 mRNA_2046 0.88 1.1
829,560 - -1.5
829,591 - 0.1
829,691 + 0.9
829,710 + 0.2
829,710 + 0.0
829,873 - -0.4
829,874 + 0.0
829,878 + -0.2