Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2045

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2044: 10412 - HMMPfam-Domain of unknown function (DUF1793)-PF08760,SUPERFAMILY--SSF48208, at 821249 to 824656 10412 mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413 mRNA_2046: 10414 - Hypothetical Protein, at 826363 to 829699 10414

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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824,375 - 0.2
824,508 + 0.3
824,541 + 0.3
824,556 + 1.9
824,950 - 0.4
824,955 - -0.0
824,961 + -0.8
825,179 - 10413 mRNA_2045 0.28 0.4
825,381 - 10413 mRNA_2045 0.47 1.4
825,485 + 10413 mRNA_2045 0.56 1.4
825,712 + 10413 mRNA_2045 0.78 1.0
825,739 - 10413 mRNA_2045 0.80 0.2
825,761 + 10413 mRNA_2045 0.82 0.5
825,978 - 1.7
825,996 + 1.9
826,284 - -0.6
826,315 - 0.2
826,322 + -0.3
826,329 - -1.8
826,337 + 0.4
826,337 - -0.1
826,341 - -0.0
826,359 - 0.2
826,361 + 0.2
826,362 - -0.0
826,406 + 0.7
826,497 - -0.9
826,567 + -0.3
826,662 - 0.1
826,878 - 10414 mRNA_2046 0.15 0.5
826,917 + 10414 mRNA_2046 0.17 -1.4