Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2044

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2043: 10411 - Hypothetical Protein, at 820577 to 820768 10411 mRNA_2044: 10412 - HMMPfam-Domain of unknown function (DUF1793)-PF08760,SUPERFAMILY--SSF48208, at 821249 to 824656 10412 mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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820,822 - 1.3
820,941 - 2.4
820,942 + 0.3
820,943 + -0.9
820,958 + 1.0
821,104 - 0.5
821,137 + -0.5
821,140 + -0.2
821,163 + 0.9
821,166 + -0.1
821,176 - -0.2
821,179 + 1.5
821,179 + 0.0
821,228 + -0.8
821,343 + 0.0
821,630 + 10412 mRNA_2044 0.11 1.4
821,723 + 10412 mRNA_2044 0.14 -0.2
821,895 + 10412 mRNA_2044 0.19 1.0
821,901 - 10412 mRNA_2044 0.19 0.7
821,940 + 10412 mRNA_2044 0.20 -2.2
822,194 + 10412 mRNA_2044 0.28 1.8
822,335 - 10412 mRNA_2044 0.32 2.0
822,764 - 10412 mRNA_2044 0.44 1.3
823,351 - 10412 mRNA_2044 0.62 1.1
823,463 - 10412 mRNA_2044 0.65 -1.1
824,375 - 0.2
824,508 + 0.3
824,541 + 0.3
824,556 + 1.9
824,950 - 0.4
824,955 - -0.0
824,961 + -0.8
825,179 - 10413 mRNA_2045 0.28 0.4
825,381 - 10413 mRNA_2045 0.47 1.4
825,485 + 10413 mRNA_2045 0.56 1.4