Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1841

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342756 to 344236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344816 to 347199 10210

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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341,780 - -0.2
341,783 + 0.1
341,788 + -0.0
341,790 - 0.1
341,796 - 0.8
341,824 - -0.1
341,825 - -0.7
341,846 - 1.5
341,847 + 0.6
341,849 - -0.7
341,853 - -0.4
341,857 + 0.0
341,866 + 2.8
341,868 - 0.8
341,869 + 0.4
341,871 + 0.8
341,880 + 1.6
341,889 - 0.6
341,889 + 0.8
341,889 - -0.0
341,892 + 1.6
341,892 + -0.6
341,892 + 0.9
341,904 - 0.7
341,908 - 0.3
341,908 - -0.1
341,908 - -0.0
341,908 + -0.1
341,909 - 0.7
341,909 + 1.2
341,911 + 1.9
341,911 + -0.5
341,916 + 1.2
341,921 - 1.1
341,922 + -0.2
341,924 - 0.1
341,924 + 0.3
341,925 + -1.2
341,928 + -0.1
341,942 - 1.2
341,952 - 0.1
341,969 + -0.4
341,974 + 0.9
341,993 + -1.6
341,994 + 0.7
342,016 - 0.3
342,018 - 2.1
342,025 - 0.7
342,027 + 1.4
342,029 + 0.7
342,034 - -1.0
342,054 - 0.9
342,071 + -0.2
342,076 + -0.4
342,082 + 1.2
342,090 - -0.6
342,097 - -0.2
342,099 + 0.7
342,108 + 0.4
342,122 - 0.1
342,141 - 0.7
342,142 + 1.0
342,155 - 1.6
342,160 + 2.1
342,160 + -1.8
342,175 + 1.2
342,175 + -0.5
342,187 - -1.6
342,222 + 0.3
342,238 + -0.8
342,239 - -0.5
342,240 + 0.6
342,254 + -3.0
342,269 - -2.9
342,370 - -0.4
342,371 - 0.5
342,374 + -1.3
342,376 + 1.2
342,381 + 0.6
342,383 + 0.4
342,386 - -0.4
342,390 - 0.1
342,392 + 0.8
342,394 + 0.7
342,396 - 0.4
342,398 - 1.0
342,400 + 0.3
342,422 + 0.1
342,425 - 0.3
342,437 - 0.6
342,438 - -0.4
342,449 - 0.1
342,450 - 0.5
342,451 - 1.0
342,455 - -1.0
342,458 + -0.3
342,458 + -0.3
342,463 - -0.8
342,467 - -1.6
342,468 + -0.4
342,475 + -0.6
342,482 - -0.1
342,486 - -1.8
342,491 + -0.1
342,493 - -0.2
342,506 + -0.3
342,514 + 0.1
342,519 - 0.8
342,528 + 0.5
342,531 - 2.1
342,531 + 0.9
342,554 + -0.3
342,562 + -0.2
342,566 - -1.6
342,566 + -0.1
342,577 + -0.3
342,577 + -0.8
342,605 - -0.7
342,609 - -0.9
342,621 - -0.4
342,627 - 0.6
342,637 - -1.4
342,702 - 0.4
342,708 - 1.5
342,803 + -0.5
342,808 - -0.5
342,815 - -1.4
342,818 + 1.2
342,824 + 0.2
342,826 + -0.2
342,840 + 0.5
342,861 + -1.1
342,975 + 10209 mRNA_1841 0.15 -1.5
343,087 - 10209 mRNA_1841 0.22 -1.0
343,121 + 10209 mRNA_1841 0.25 -0.5
343,140 + 10209 mRNA_1841 0.26 -1.1
343,284 - 10209 mRNA_1841 0.36 -0.4
343,296 + 10209 mRNA_1841 0.36 -0.4
343,539 + 10209 mRNA_1841 0.53 -1.2
343,715 - 10209 mRNA_1841 0.65 1.7
344,164 - -0.3
344,262 - -2.0
344,331 - 0.6
344,560 - -0.1
344,567 + -2.6
344,583 - 1.2
344,590 - 1.8
344,610 - 1.5
344,643 - 0.3
344,653 + 0.2
344,691 + 0.2
344,693 - -0.8
344,704 + 0.4
344,704 - -0.6
344,727 + -0.6
344,748 + 0.7
344,863 - -2.0
345,015 + 1.9
345,034 - -1.0