Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1839

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336405 to 337627 10206 mRNA_1839: 10207 - Hypothetical Protein, at 337728 to 339625 10207 mRNA_1840: 10208 - Hypothetical Protein, at 340011 to 340722 10208

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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337,638 - -0.1
338,096 + 10207 mRNA_1839 0.19 1.2
338,214 + 10207 mRNA_1839 0.26 0.2
338,532 + 10207 mRNA_1839 0.42 0.6
338,609 + 10207 mRNA_1839 0.46 0.4
338,638 - 10207 mRNA_1839 0.48 1.6
338,674 - 10207 mRNA_1839 0.50 0.3
338,693 + 10207 mRNA_1839 0.51 -0.3
338,817 + 10207 mRNA_1839 0.57 1.5
338,853 - 10207 mRNA_1839 0.59 1.0
338,946 - 10207 mRNA_1839 0.64 0.2
338,954 + 10207 mRNA_1839 0.65 2.3
338,973 + 10207 mRNA_1839 0.66 -0.7
339,113 - 10207 mRNA_1839 0.73 0.8
339,387 - 10207 mRNA_1839 0.87 1.3
339,411 + 10207 mRNA_1839 0.89 0.4
339,724 + 0.1
339,862 - 0.9
339,880 - 0.8
339,882 + -0.1
339,999 + -0.1
340,444 + 10208 mRNA_1840 0.61 0.3
340,604 - 10208 mRNA_1840 0.83 -1.1