Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1831

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1830: 10198 - K00809 DHPS, dys deoxyhypusine synthase, at 317311 to 318689 10198 mRNA_1831: 10199 - KOG3274 Uncharacterized conserved protein, AMMECR1, at 318985 to 319920 10199 mRNA_1832: 10200 - K11188 PRDX6 peroxiredoxin 6, 1-Cys peroxiredoxin, at 320371 to 321858 10200

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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318,870 - -0.4
318,954 - 0.7
318,955 + -0.1
318,961 - -0.2
318,978 + 0.3
319,117 - 10199 mRNA_1831 0.14 1.0
319,248 - 10199 mRNA_1831 0.28 0.9
319,554 + 10199 mRNA_1831 0.61 1.9
319,679 + 10199 mRNA_1831 0.74 0.3
319,841 - 0.6
319,843 - 0.3
319,925 + 0.4
319,982 - -0.1
319,989 - 0.1
319,991 + -0.5
319,991 + -0.4
320,002 - -0.9
320,003 - -0.7
320,008 + 2.0
320,038 + 0.8
320,043 + 0.4
320,069 + -1.4
320,088 - -0.7
320,094 - 0.0
320,105 + 0.3
320,111 - -1.3
320,111 + 1.4
320,118 + -0.4
320,126 + -1.2
320,133 - 1.5
320,136 - 1.0
320,136 - 0.1
320,137 + -0.1
320,139 - 1.0
320,140 + 0.5
320,141 - 0.2
320,143 - -0.1
320,149 - 0.4
320,166 + 0.6
320,288 + 0.2
320,310 + 0.2
320,871 + 10200 mRNA_1832 0.34 -0.2
320,916 - 10200 mRNA_1832 0.37 -0.2