Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1822

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294810 to 296545 10190

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
293,854 - 10189 mRNA_1821 0.89 0.8
293,983 - 1.0
294,137 - 0.6
294,190 - 1.0
294,407 - 0.6
294,410 + 0.0
294,451 + 1.8
294,562 - 1.3
295,045 - 10190 mRNA_1822 0.14 -0.6
295,911 + 10190 mRNA_1822 0.63 0.7
295,949 + 10190 mRNA_1822 0.66 -0.4
296,067 - 10190 mRNA_1822 0.72 -0.7
296,194 - 10190 mRNA_1822 0.80 0.6
296,212 - 10190 mRNA_1822 0.81 -0.6
296,230 - 10190 mRNA_1822 0.82 0.1
296,234 - 10190 mRNA_1822 0.82 -0.9
296,277 - 10190 mRNA_1822 0.85 1.5
296,286 - 10190 mRNA_1822 0.85 1.0
296,389 + -0.1
296,395 - -0.1
296,396 - -0.9
296,423 + 2.0
296,533 + 0.7
296,535 + -0.3
296,539 + 1.5
296,554 + -0.5
296,554 - -0.0
296,557 - 0.6
296,568 + -0.4
296,581 - 0.5
296,601 + 1.2
296,693 + -1.1
296,707 - -0.3
296,708 + -0.6
296,718 + -2.0
296,720 + -0.4
296,728 - 0.4
296,738 + -0.3
296,743 + -0.0
296,744 + 1.6
296,745 - -0.1
296,752 + 0.6
296,756 + -0.1
296,760 - 2.1
296,763 + 0.4
296,763 + 0.5
296,800 - 0.3
296,868 - -0.8
296,874 - -1.2
296,876 - 0.5
296,879 + 1.8
296,879 + -0.3
296,883 - -0.3
296,885 - -0.1
296,893 - 0.6
297,020 + 1.2
297,036 + 1.1
297,049 + 0.8
297,082 - 0.4
297,086 + -0.5
297,088 + 0.5
297,089 + 0.3
297,110 + 0.5
297,113 + 2.0
297,132 - 0.5
297,133 + 1.3
297,144 - 0.6
297,149 + 1.7
297,153 - 0.3
297,156 + 0.4
297,157 - 0.3
297,158 - 0.0
297,164 - -1.4
297,195 - 0.4
297,206 - 1.1
297,207 + 0.3
297,209 - 0.7
297,209 + 1.5
297,210 + -0.9
297,213 - 1.0
297,229 + 0.6
297,257 - 0.3
297,267 + 1.8
297,305 + -0.3
297,329 - 0.5
297,340 + 0.5
297,344 - 0.5
297,371 - -0.4
297,379 + 0.3
297,389 + 0.8
297,392 + -0.2
297,490 + -0.1
297,509 - 0.4
297,514 + -0.7
297,541 - -0.6